Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015877336.1_cds_XP_016436450.1_32310
CDS Infomation

[gene=LOC107762593] [db_xref=GeneID:107762593] [protein=cycloartenol Synthase-like] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016436450.1] [location=complement(join(<766..846,2035..2212,2367..2510,2619..2665,5468..5524,6914..7012,7088..7210,7321..7443,7587..7700,8020..8208,10559..10725,11131..11215,11326..11520,11663..11752,11881..12066,13637..13834))] [gbkey=CDS]
Sequence

ATGTGGAAGTTGAAGATAGCAGAAGGAGGGAATCCATGGCTACGGACAACAAACAATCAT
GTAGGTAGGGAACTATGGGAGTTTGATCCAGAACTCGGATCTCCGGAAGATCGAGCGGAG
ATCGACAAGTTTCGCGAGCATTTCCACAAACATCGCTTTGAGCAAAAGCATAGTGCTGAT
CTCATTATGCGTTATCAGCTATCAAAGGAGAATCCAGGAATTACTATTTTGCCCCAAGTC
AAAGTACAAGGCAATGAAGATATTACAGAAGATACTGTAGCTACCACGCTCAGAAGAGCA
CTAAGTTTTTATTCCACTCTACAAACTCATGATGGTCATTGGGCTGGAGATTATGGAGGG
CCGATGTTTCTAATGCCTGGCATGGTCATTGCTCTATCTGTTACGGGGGCACTCAATGCA
GTATTAACAAGCGAACATAAACGTGAAATGATTCGATATCTTTATAACCATCAGAACAGT
GATGGTGGATGGGGCTTGCACATTGAGGGCCACAGCACCATGTTTGGTTCTGTTTTGAGC
TATGTTACTCTAAGGTTACTTGGAGAAGGAGCTAATGATGGAGAAGGGGCCATGGAGAAG
GGCCGTAAATGGATTCTGGATCATGGTAGTGCCACGGCCATTACTTCATGGGGGAAAATG
TGGCTCACAGTGCTTGGAGCATTCGACTGGTCTGGGAACAATCCACTCCCTCCGGAAATA
TGGCTTCTTCCCTACTTCCTTCCAATTCATCCTGGAAGAATGTGGTGTCACTGCAGGATG
GTTTATCTTCCTATGTGCTACCTGTATGGTAAAAGGTTCGTTGGCCCAATCACGCCAACA
GTTTTATCTTTGAGAAAGGAGCTCTTTACAGTGCCTTATCATGAGATAGATTGGAATAAA
GCACGCAATGAGTGCGCAAAGGAAGACCTTTACTACCCGCACCCTCTAGTACAAGATATC
CTGTGGGCTTCACTTCACAAGGTTGTGGAACCTATTCTGATGCATTGGCCAGGGAAAAGA
TTGAGAGAAAAAGCTCTCCGCATAGTGATGGAGCACATTCATTATGAAGATGAAAACACT
CGTTACATATGCATAGGACCTGTAAACAAGATTTTAAATATGCTTTGCTGCTGGGTTGAA
GATCCTAATTCAGAAGCTTTCAAGTTGCACCTTCCAAGAATTCATGACTATATGTGGGTT
GCTGAAGATGGCATGAAAATTAAGGGATACAATGGAAGTCAATCTTGGGATACTTCATTT
GCAATTCAAGCAATCATTGCAACAGAGCTTGGCGAGGAATATGGTTCAGCATTGAGAAAA
GCGCATTCATTCATAAAAAATACACAGGTGTTAGATGATTGCCCAGGCAATCTAGATTTC
TGGTACCGTCATATTTCAAAAGGTGCTTGGCCCTTTTCAACTGCAGATCACGGATGGCCC
ATTTCAGATTGTACTGCAGAGGGACTTAAAGCAACTCTTCTATTATCAAAACTACCATCA
GAGATAGTCGGTGATCCATTGGATGCAAAGCGTTTCTATGATGCTGTAAATGTTTTGCTT
TCTTTACAGAATAGTGGTGGTGGCTTTGCAACATATGAACTATCGAGGTCATATCCGTGG
TTAGAGATAATCAATCCTGCTGAGACTTTTGGAGATATTGTTATTGATTACCCTTATGTA
GAGTGTTCCTCAGCTGCAATTCAAGCTTTAACAGCATTTAAGAAATTATACCCTGGTCAT
CGCAAAGAAGAAGTGGAACGCTGTATTGCTAAAGCTGCTGCCTTCATTGAAAAGATTCAA
GAAGCAGATGGCTCCTGGTATGGCTCTTGGGCAGTTTGCTTCACCTATGGCACTTGGTTT
GGGGTGCTTGGCTTACTAGCTGCAGGAAGGAACTACACTAATTCTTCCAGCATCCGTAAG
GCTTGTGACTTTTTGTTGTCCAAACAAATCTCATCTGGTGGCTGGGGGGAGAGTTACCTG
TCTTGTCAAAACAAGGTGTATACAAATCTTGAAGGCAACAGATATCATGTTGTAAATACA
TCATGGGCTATGCTGACTCTAATTGCTGCTGGACAG

Peptide Sequence

PEP ID

XP_016436450.1
PEP Infomation

PREDICTED: cycloartenol Synthase-like [Nicotiana tabacum]
Sequence

MWKLKIAEGGNPWLRTTNNHVGRELWEFDPELGSPEDRAEIDKFREHFHKHRFEQKHSAD
LIMRYQLSKENPGITILPQVKVQGNEDITEDTVATTLRRALSFYSTLQTHDGHWAGDYGG
PMFLMPGMVIALSVTGALNAVLTSEHKREMIRYLYNHQNSDGGWGLHIEGHSTMFGSVLS
YVTLRLLGEGANDGEGAMEKGRKWILDHGSATAITSWGKMWLTVLGAFDWSGNNPLPPEI
WLLPYFLPIHPGRMWCHCRMVYLPMCYLYGKRFVGPITPTVLSLRKELFTVPYHEIDWNK
ARNECAKEDLYYPHPLVQDILWASLHKVVEPILMHWPGKRLREKALRIVMEHIHYEDENT
RYICIGPVNKILNMLCCWVEDPNSEAFKLHLPRIHDYMWVAEDGMKIKGYNGSQSWDTSF
AIQAIIATELGEEYGSALRKAHSFIKNTQVLDDCPGNLDFWYRHISKGAWPFSTADHGWP
ISDCTAEGLKATLLLSKLPSEIVGDPLDAKRFYDAVNVLLSLQNSGGGFATYELSRSYPW
LEIINPAETFGDIVIDYPYVECSSAAIQALTAFKKLYPGHRKEEVERCIAKAAAFIEKIQ
EADGSWYGSWAVCFTYGTWFGVLGLLAAGRNYTNSSSIRKACDFLLSKQISSGGWGESYL
SCQNKVYTNLEGNRYHVVNTSWAMLTLIAAGQAERNPTPLHHAAKALINAQLENGDFPQQ
EISGVFNRNCMISYSAYRNIFPIWALGEYRSRVLKAK

Transcript Sequence

Gene sequence data has not been registered.